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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7717562 chr5:120155940 A/T PBX3 chr9:128509624-128729656:+ 0.26 6.14 1.78E-9 Box Plot
THCA rs7717787 chr5:45466616 C/G LOC647121 chr1:121260910-121313686:+ 0.34 7.23 1.94E-12 Box Plot
THCA rs7718785 chr5:45725597 C/T LOC647121 chr1:121260910-121313686:+ 0.38 8.06 6.3E-15 Box Plot
THCA rs7719125 chr5:176689166 G/T LOC388955 chr2:63849182-63850159:- 0.35 8.3 1.04E-15 Box Plot
THCA rs7719401 chr5:45938815 G/A LOC647121 chr1:121260910-121313686:+ 0.37 7.95 1.37E-14 Box Plot
THCA rs7720428 chr5:49752612 T/A LOC647121 chr1:121260910-121313686:+ 0.38 8.18 2.55E-15 Box Plot
THCA rs7720482 chr5:46106163 T/G LOC647121 chr1:121260910-121313686:+ -0.38 -8.12 4.0E-15 Box Plot
THCA rs77205736 chr8:10153460 C/T SGK223 chr8:8175258-8244008:- 0.36 5.88 7.91E-9 Box Plot
THCA rs7720870 chr5:46139676 C/T LOC647121 chr1:121260910-121313686:+ 0.36 7.69 8.41E-14 Box Plot
THCA rs77209282 chr11:34810424 A/C PNLIP chr10:118305443-118327367:+ 0.18 5.91 6.38E-9 Box Plot
THCA rs7721808 chr5:49658970 A/T LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs77228951 chr10:88881176 G/A FAM35B chr10:46897641-46939143:+ -0.66 -10.98 3.63E-25 Box Plot
THCA rs77229792 chr12:94740151 T/C C6orf176 chr6:166337536-166401527:- -0.54 -6.1 2.2E-9 Box Plot
THCA rs7723218 chr5:45943118 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.06 6.01E-15 Box Plot
THCA rs7723380 chr5:45428535 T/C LOC647121 chr1:121260910-121313686:+ 0.36 7.56 2.15E-13 Box Plot